2022 Fall
COMPSCI C176 001 - LEC 001
Algorithms for Computational Biology
Nilah Ioannidis, Yun S Song
Class #:33822
Units: 4
Instruction Mode:
In-Person Instruction
Offered through
Electrical Engineering and Computer Sciences
Current Enrollment
Total Open Seats:
13
Enrolled: 55
Waitlisted: 0
Capacity: 68
Waitlist Max: 40
No Reserved Seats
Hours & Workload
8 hours of outside work hours per week, 1 hours of the exchange of opinions or questions on course material per week, and 3 hours of instructor presentation of course materials per week.
Final Exam
THU, DECEMBER 15TH
11:30 am - 02:30 pm
Cory 277
Other classes by Nilah Ioannidis
Other classes by Yun S Song
Course Catalog Description
This course will provide familiarity with algorithms and probabilistic models that arise in various computational biology applications, such as suffix trees, suffix arrays, pattern matching, repeat finding, sequence alignment, phylogenetics, hidden Markov models, gene finding, motif finding, linear/logistic regression, random forests, convolutional neural networks, genome-wide association studies, pathogenicity prediction, and sequence-to-epigenome prediction.
Rules & Requirements
Credit Restrictions
Students will receive no credit for COMPSCI C176 after completing COMPSCI 176. A deficient grade in COMPSCI C176 may be removed by taking COMPSCI 176.
Repeat Rules
Course is not repeatable for credit.
Reserved Seats
Current Enrollment
No Reserved Seats
Textbooks & Materials
See class syllabus or https://calstudentstore.berkeley.edu/textbooks for the most current information.
Guide to Open, Free, & Affordable Course Materials