2021 Fall COMPSCI 198 102 GRP 102

2021 Fall

COMPSCI 198 102 - GRP 102

Directed Group Studies for Advanced Undergraduates

Algorithmic Fairness and the Genome (2 hour version)

Nilah Ioannidis

Aug 25, 2021 - Dec 10, 2021
We
03:00 pm - 04:59 pm
Internet/Online
Class #:33441
Units: 2

Instruction Mode: Pending Review

Current Enrollment

Total Open Seats: 15
Enrolled: 15
Waitlisted: 0
Capacity: 30
Waitlist Max: 15
No Reserved Seats

Hours & Workload

2 to 8 hours of outside work hours per week, and 1 to 4 hours of directed group study per week.

Other classes by Nilah Ioannidis

Course Catalog Description

Group study of selected topics in Computer Sciences, usually relating to new developments.

Class Description

AI is eating the world. Unfortunately, these machine learning models have drawn unfortunate attention in recent years for being “biased” (e.g ttps://fairmlbook.org/) and automating discrimination. Within genomics, a field replete with complicated ML, these biases lead to dramatically different health outcomes for persons of different socioeconomic status or ancestry. Neither AI nor genomics can be fully “de-biased” in a single semester, but we hope to provide a concise yet detailed overview of existing problems and known frameworks to detect and prevent bias through the emerging field of algorithmic fairness. This student-led discussion group (with multiple anticipated guest speakers!) is designed to equip the next generation of researchers with the awareness and structural competencies to address bias, and is divided into two consecutive parts. Part 1: Algorithmic Fairness in AI (approx. weeks 1-6, 8) Part 2: Fairness and Model Portability in Genomics (approx. weeks 7, 9-15) At the end of the course, we hope participants will be able to answer the following in their own terms: 1) What is fairness in machine learning, and what are common causes of unfairness? 2) How can cultural biases impact datasets and modeling assumptions? What kind of approaches can account for this situation? 3) (2-hour option) What parallels exist between algorithmic fairness and model portability in genomics? 4) (2-hour option) How can we account for patterns of genetic variation when analyzing genomic data?

Class Notes

CS-focused enrollees may consider the 1-hour enrollment option, while Genomics or Computational Biology enrollees should opt for the complete 2-hour option.

2 hour option: attendance expected (most) discussions -- suitable for those interested in fairness with respect to genomic and he.. show more
CS-focused enrollees may consider the 1-hour enrollment option, while Genomics or Computational Biology enrollees should opt for the complete 2-hour option.

2 hour option: attendance expected (most) discussions -- suitable for those interested in fairness with respect to genomic and healthcare data. The final week will be dedicated to a discussion group of mini-projects and course reflections from 2 hour attendees. show less

Rules & Requirements

Repeat Rules

Reserved Seats

Current Enrollment

No Reserved Seats

Textbooks & Materials

See class syllabus or https://calstudentstore.berkeley.edu/textbooks for the most current information.

Textbook Lookup

Guide to Open, Free, & Affordable Course Materials

eTextbooks

Associated Sections

None